Quinoa unit test code coverage report
Current view: top level - Base - Reader.cpp (source / functions) Hit Total Coverage
Commit: Quinoa_v0.3-957-gb4f0efae0 Lines: 20 34 58.8 %
Date: 2021-11-09 12:13:43 Functions: 3 6 50.0 %
Legend: Lines: hit not hit | Branches: + taken - not taken # not executed Branches: 26 92 28.3 %

           Branch data     Line data    Source code
       1                 :            : // *****************************************************************************
       2                 :            : /*!
       3                 :            :   \file      src/Base/Reader.cpp
       4                 :            :   \copyright 2012-2015 J. Bakosi,
       5                 :            :              2016-2018 Los Alamos National Security, LLC.,
       6                 :            :              2019-2021 Triad National Security, LLC.
       7                 :            :              All rights reserved. See the LICENSE file for details.
       8                 :            :   \brief     Reader class definition
       9                 :            :   \details   Reader base class declaration. Reader base servers as a base class
      10                 :            :     for various file readers. It does generic low-level I/O, e.g., opening and
      11                 :            :     closing a file, and associated error handling.
      12                 :            : */
      13                 :            : // *****************************************************************************
      14                 :            : 
      15                 :            : #include <cstdio>
      16                 :            : #include <exception>
      17                 :            : #include <string>
      18                 :            : 
      19                 :            : #include "Reader.hpp"
      20                 :            : #include "Exception.hpp"
      21                 :            : 
      22                 :            : using tk::Reader;
      23                 :            : 
      24                 :         22 : Reader::Reader( const std::string& filename, std::ios_base::openmode mode ) :
      25         [ +  - ]:         25 :   m_filename( filename ), m_inFile()
      26                 :            : // *****************************************************************************
      27                 :            : //  Constructor: Acquire file handle
      28                 :            : //! \param[in] filename Name of file to open for reading
      29                 :            : //! \param[in] mode Open mode, see
      30                 :            : //!   http://en.cppreference.com/w/cpp/io/ios_base/openmode
      31                 :            : // *****************************************************************************
      32                 :            : {
      33                 :            :   // Make sure there is a filename
      34                 :            :   Assert( !filename.empty(), "No filename specified" );
      35                 :            : 
      36                 :            :   // Check if file exists, throw exception if it does not
      37         [ +  - ]:         22 :   m_inFile.open( filename, mode );
      38 [ +  + ][ +  - ]:         24 :   ErrChk( m_inFile.good(), "Failed to open file: " + filename );
         [ +  - ][ +  - ]
         [ -  + ][ -  + ]
      39                 :            : 
      40                 :            :   // Attempt to read a character, throw if it fails
      41                 :            :   // It is curious that on some systems opening a directory instead of a file
      42                 :            :   // with the above ifstream::open() call does not set the failbit. Thus we get
      43                 :            :   // here fine, so we try to read a character from it. If it is a directory or
      44                 :            :   // an empty file the read will fail, so we throw. Read more at: http://
      45                 :            :   // stackoverflow.com/questions/9591036/
      46                 :            :   // ifstream-open-doesnt-set-error-bits-when-argument-is-a-directory.
      47         [ +  - ]:         20 :   m_inFile.get();
      48 [ +  + ][ +  - ]:         21 :   ErrChk( m_inFile.good(), "Failed to read from file: " + filename );
         [ +  - ][ +  - ]
         [ -  + ][ -  + ]
      49                 :            : 
      50                 :            :   // Close it
      51         [ +  - ]:         19 :   m_inFile.close();
      52 [ -  + ][ -  - ]:         19 :   ErrChk( !m_inFile.fail(), "Failed to close file: " + filename );
         [ -  - ][ -  - ]
         [ -  - ][ -  - ]
      53                 :            : 
      54                 :            :   // Re-open
      55         [ +  - ]:         19 :   m_inFile.open( filename, std::ifstream::in );
      56 [ -  + ][ -  - ]:         19 :   ErrChk( m_inFile.good(), "Failed to open file: " + filename );
         [ -  - ][ -  - ]
         [ -  - ][ -  - ]
      57                 :         19 : }
      58                 :            : 
      59                 :         19 : Reader::~Reader() noexcept
      60                 :            : // *****************************************************************************
      61                 :            : //  Destructor: Release file handle
      62                 :            : //! \details    Exception safety: no-throw guarantee: never throws exceptions.
      63                 :            : //!   Error handling, while done by throwing and catching exceptions, results in
      64                 :            : //!   warnings to terminal. We use C-style printf, since that will not throw
      65                 :            : //!   exceptions.
      66                 :            : // *****************************************************************************
      67                 :            : {
      68                 :            :   // Clear failbit triggered by eof, so close() won't throw a false FAILED_CLOSE
      69                 :         19 :   m_inFile.clear();
      70                 :            : 
      71                 :            :   try {
      72                 :            : 
      73         [ +  - ]:         19 :     m_inFile.close();
      74 [ -  + ][ -  - ]:         19 :     ErrChk( !m_inFile.fail(), "Failed to close file: " + m_filename );
         [ -  - ][ -  - ]
         [ -  - ][ -  - ]
      75                 :            : 
      76                 :            :   } // emit only a warning on error
      77                 :          0 :     catch (Exception& e) {
      78                 :          0 :       e.handleException();
      79                 :            :     }
      80                 :          0 :     catch (std::exception& e) {
      81                 :          0 :       printf( ">>> WARNING: std::exception in MeshReader destructor: %s\n",
      82                 :          0 :               e.what() );
      83                 :            :     }
      84                 :          0 :     catch (...) {
      85                 :          0 :       printf( ">>> WARNING: UNKNOWN EXCEPTION in MeshReader destructor\n" );
      86                 :            :     }
      87                 :         19 : }
      88                 :            : 
      89                 :            : std::string
      90         [ +  - ]:         12 : Reader::firstline()
      91                 :            : // *****************************************************************************
      92                 :            : //  Return first line (for detection of file type based on header)
      93                 :            : //! \return First line read from file. This can be used for detection of file
      94                 :            : //!   type based on header.
      95                 :            : // *****************************************************************************
      96                 :            : {
      97                 :            :   std::string s;
      98         [ +  - ]:         12 :   std::getline( m_inFile, s );          // read the first line
      99         [ +  - ]:         12 :   m_inFile.seekg( 0, std::ios::beg );   // seek back to the beginning of file
     100                 :         12 :   return s;
     101                 :            : }
     102                 :            : 
     103                 :            : std::vector< std::string >
     104                 :          0 : Reader::lines()
     105                 :            : // *****************************************************************************
     106                 :            : // Read file and return a string for each line
     107                 :            : //! \return A std::vector< std::string >, a string for each line of a file.
     108                 :            : // *****************************************************************************
     109                 :            : {
     110                 :            :   std::string s;
     111                 :            :   std::vector< std::string > ls;
     112 [ -  - ][ -  - ]:          0 :   while ( std::getline( m_inFile, s ) ) ls.push_back( s );
                 [ -  - ]
     113                 :          0 :   return ls;
     114                 :            : }
     115                 :            : 
     116                 :            : std::string
     117                 :          0 : Reader::line( std::size_t lineNum )
     118                 :            : // *****************************************************************************
     119                 :            : // Read a given line from file
     120                 :            : //! \param[in] lineNum Line number to read from file
     121                 :            : //! \return Line read from file at line given
     122                 :            : // *****************************************************************************
     123                 :            : {
     124                 :            :   std::string s;
     125                 :            :   std::size_t num = 0;
     126 [ -  - ][ -  - ]:          0 :   while ( std::getline( m_inFile, s ) && ++num < lineNum ) {}
                 [ -  - ]
     127         [ -  - ]:          0 :   m_inFile.seekg( 0, std::ios::beg );   // seek back to the beginning of file
     128                 :          0 :   return s;
     129                 :            : }

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